Online Server for Protein Hinge Prediction using PACKMAN

Information & Instructions

PACKMAN is a multi-utility tool to study protein packing and its effect on protein dynamics. It currently has the functionality to identify the protein hinges (separating the domains). It can also be used to read, write, manipulate and analyze protein molecules and it's properties through its API.

For more information on the PACKMAN visit https://github.com/Pranavkhade/PACKMAN

This webpage will provide the protein hinge predictions online. Please refer to the following research article to know more about the parameters and citation:

1. Khade PM, Kumar A, Jernigan RL. Characterizing and Predicting Protein Hinges for Mechanistic Insight. J Mol Biol. November 2019. doi:10.1016/j.jmb.2019.11.018

Protein animation

Recommended: 2.8 for closed; 4.5 for open form, Please refer to the paper for more details
If provided, the PBD with this ID will be downloaded and used as the input file.
Recommended: 4, Please refer to the paper for more details
Recommended: 5, Please refer to the paper for more details
Enter The Chain ID
Has no effect unless chain is specified.
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